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» Cloud computing for comparative genomics
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104
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BMCBI
2006
169views more  BMCBI 2006»
15 years 23 days ago
Comparative analysis of haplotype association mapping algorithms
Background: Finding the genetic causes of quantitative traits is a complex and difficult task. Classical methods for mapping quantitative trail loci (QTL) in miceuse an F2 cross b...
Phillip McClurg, Mathew T. Pletcher, Tim Wiltshire...
106
Voted
CIBCB
2008
IEEE
15 years 7 months ago
An information theoretic approach for the discovery of irregular and repetitive patterns in genomic data
sequence content at an abstract level and offers novel ways to examine the information contained in them. Our approach is an information theoretic search process which uses patter...
Willard Davis, Ananth Kalyanaraman, Diane J. Cook
84
Voted
RECOMB
2003
Springer
16 years 1 months ago
Designing seeds for similarity search in genomic DNA
Large-scale comparison of genomic DNA is of fundamental importance in annotating functional elements of genomes. To perform large comparisons efficiently, BLAST (Methods: Companio...
Jeremy Buhler, Uri Keich, Yanni Sun
COMPLEXITY
2004
165views more  COMPLEXITY 2004»
15 years 17 days ago
Sex promotes gamete selection: A quantitative comparative study of features favoring the evolution of sex
: Explaining the maintenance of sexual reproduction remains one of the greatest challenges in biology. The theoretical oddity of sex is based on at least three advantages that asex...
Klaus Jaffe
115
Voted
IPPS
2003
IEEE
15 years 6 months ago
A Fast Algorithm for the Exhaustive Analysis of 12-Nucleotide-Long DNA Sequences. Applications to Human Genomics
We have developed a new algorithm that allows the exhaustive determination of words of up to 12 nucleotides in DNA sequences. It is fast enough as to be used at a genomic scale ru...
Vicente Arnau, Ignacio Marín