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» Cloud computing for comparative genomics
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87
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RECOMB
2005
Springer
16 years 1 months ago
Power Boosts for Cluster Tests
Abstract. Gene cluster significance tests that are based on the number of genes in a cluster in two genomes, and how compactly they are distributed, but not their order, may be mad...
David Sankoff, Lani Haque
108
Voted
RECOMB
2008
Springer
16 years 1 months ago
Perfect DCJ Rearrangement
We study the problem of transforming a multichromosomal genome into another using Double-Cut-and-Join (DCJ) operations. We introduce the notion of DCJ scenario that does not break ...
Sèverine Bérard, Annie Chateau, Cedr...
129
Voted
BMCBI
2011
14 years 4 months ago
Proteinortho: Detection of (Co-)Orthologs in Large-Scale Analysis
Background: Orthology analysis is an important part of data analysis in many areas of bioinformatics such as comparative genomics and molecular phylogenetics. The ever-increasing ...
Marcus Lechner, Sven Findeiß, Lydia Steiner,...
115
Voted
BMCBI
2010
148views more  BMCBI 2010»
15 years 25 days ago
Calling SNPs without a reference sequence
Background: The most common application for the next-generation sequencing technologies is resequencing, where short reads from the genome of an individual are aligned to a refere...
Aakrosh Ratan, Yu Zhang, Vanessa M. Hayes, Stephan...
216
Voted
NAR
2011
330views Computer Vision» more  NAR 2011»
14 years 7 months ago
Hymenoptera Genome Database: integrated community resources for insect species of the order Hymenoptera
The Hymenoptera Genome Database (HGD) is a comprehensive model organism database that caters to the needs of scientists working on insect species of the order Hymenoptera. This sy...
Monica C. Munoz-Torres, Justin T. Reese, Christoph...