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BMCBI
2007
164views more  BMCBI 2007»
15 years 14 days ago
SEARCHPATTOOL: a new method for mining the most specific frequent patterns for binding sites with application to prokaryotic DNA
Background: Computational methods to predict transcription factor binding sites (TFBS) based on exhaustive algorithms are guaranteed to find the best patterns but are often limite...
Fathi Elloumi, Martha Nason
CAGD
2005
113views more  CAGD 2005»
15 years 10 days ago
Mesh scissoring with minima rule and part salience
This paper presents an intelligent scissoring operator for meshes. Unlike common approaches that segment a mesh using clustering schemes, we introduce a method that concentrates o...
Yunjin Lee, Seungyong Lee, Ariel Shamir, Daniel Co...
BMCBI
2004
206views more  BMCBI 2004»
15 years 9 days ago
Combining gene expression data from different generations of oligonucleotide arrays
Background: One of the important challenges in microarray analysis is to take full advantage of previously accumulated data, both from one's own laboratory and from public re...
Kyu Baek Hwang, Sek Won Kong, Steven A. Greenberg,...
NAR
2007
115views more  NAR 2007»
14 years 12 months ago
PReMod: a database of genome-wide mammalian cis-regulatory module predictions
We describe PReMod, a new database of genomewide cis-regulatory module (CRM) predictions for both the human and the mouse genomes. The prediction algorithm, described previously i...
Vincent Ferretti, Christian Poitras, Dominique Ber...
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TSP
2008
167views more  TSP 2008»
14 years 11 months ago
Multi-Task Learning for Analyzing and Sorting Large Databases of Sequential Data
A new hierarchical nonparametric Bayesian framework is proposed for the problem of multi-task learning (MTL) with sequential data. The models for multiple tasks, each characterize...
Kai Ni, John William Paisley, Lawrence Carin, Davi...