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BMCBI
2005
137views more  BMCBI 2005»
14 years 9 months ago
ArrayQuest: a web resource for the analysis of DNA microarray data
Background: Numerous microarray analysis programs have been created through the efforts of Open Source software development projects. Providing browser-based interfaces that allow...
Gary L. Argraves, Saurin D. Jani, Jeremy L. Barth,...
CIKM
2008
Springer
14 years 11 months ago
Scalable community discovery on textual data with relations
Every piece of textual data is generated as a method to convey its authors' opinion regarding specific topics. Authors deliberately organize their writings and create links, ...
Huajing Li, Zaiqing Nie, Wang-Chien Lee, C. Lee Gi...
BMCBI
2011
14 years 1 months ago
Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis
Background: Combining multiple evidence-types from different information sources has the potential to reveal new relationships in biological systems. The integrated information ca...
Artem Lysenko, Michael Defoin-Platel, Keywan Hassa...
BMCBI
2006
374views more  BMCBI 2006»
14 years 9 months ago
AMDA: an R package for the automated microarray data analysis
Background: Microarrays are routinely used to assess mRNA transcript levels on a genome-wide scale. Large amount of microarray datasets are now available in several databases, and...
Mattia Pelizzola, Norman Pavelka, Maria Foti, Paol...
RECOMB
2004
Springer
15 years 10 months ago
Modeling and Analysis of Heterogeneous Regulation in Biological Networks
Abstract. In this study we propose a novel model for the representation of biological networks and provide algorithms for learning model parameters from experimental data. Our appr...
Irit Gat-Viks, Amos Tanay, Ron Shamir