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» Clustering Genes Using Heterogeneous Data Sources
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ICML
2009
IEEE
16 years 3 months ago
Multi-assignment clustering for Boolean data
Conventional clustering methods typically assume that each data item belongs to a single cluster. This assumption does not hold in general. In order to overcome this limitation, w...
Andreas P. Streich, Mario Frank, David A. Basin, J...
BMCBI
2010
87views more  BMCBI 2010»
15 years 3 months ago
Epigenetic domains found in mouse embryonic stem cells via a hidden Markov model
Background: Epigenetics is an important layer of transcriptional control necessary for cell-type specific gene regulation. Recent studies have shown significant epigenetic pattern...
Jessica L. Larson, Guo-Cheng Yuan
SOCO
2008
Springer
15 years 3 months ago
GP on SPMD parallel graphics hardware for mega Bioinformatics data mining
Abstract We demonstrate a SIMD C++ genetic programming system on a single 128 node parallel nVidia GeForce 8800 GTX GPU under RapidMind's GPGPU Linux software by predicting te...
William B. Langdon, Andrew P. Harrison
POS
1990
Springer
15 years 7 months ago
Semantic Clustering
Appropriate clustering of objects into pages in secondary memory is crucial to achieving good performance in a persistent object store. We present a new approach, termed semantic ...
Karen Shannon, Richard T. Snodgrass
BMCBI
2006
122views more  BMCBI 2006»
15 years 3 months ago
Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
Background: A transcriptional regulatory module (TRM) is a set of genes that is regulated by a common set of transcription factors (TFs). By organizing the genome into TRMs, a liv...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen