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» Clustering Genes Using Heterogeneous Data Sources
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BMCBI
2010
134views more  BMCBI 2010»
15 years 3 months ago
ScreenMill: A freely available software suite for growth measurement, analysis and visualization of high-throughput screen data
Background: Many high-throughput genomic experiments, such as Synthetic Genetic Array and yeast two-hybrid, use colony growth on solid media as a screen metric. These experiments ...
John C. Dittmar, Robert J. D. Reid, Rodney Rothste...
BMCBI
2010
102views more  BMCBI 2010»
15 years 3 months ago
Alignment and clustering of phylogenetic markers - implications for microbial diversity studies
Background: Molecular studies of microbial diversity have provided many insights into the bacterial communities inhabiting the human body and the environment. A common first step ...
James Robert White, Saket Navlakha, Niranjan Nagar...
DOLAP
2007
ACM
15 years 7 months ago
Optimal chunking of large multidimensional arrays for data warehousing
ss domain. Using this more abstract approach means that more data sources of varying types can be incorporated with less effort, and such heterogeneous data sources might be very r...
Ekow J. Otoo, Doron Rotem, Sridhar Seshadri
ICDE
2008
IEEE
166views Database» more  ICDE 2008»
16 years 4 months ago
A Clustered Index Approach to Distributed XPath Processing
Supporting top-k queries over distributed collections of schemaless XML data poses two challenges. While XML supports expressive query languages such as XPath and XQuery, these la...
Georgia Koloniari, Evaggelia Pitoura
BMCBI
2010
124views more  BMCBI 2010»
15 years 3 months ago
GPFrontend and GPGraphics: graphical analysis tools for genetic association studies
Background: Most software packages for whole genome association studies are non-graphical, purely text based programs originally designed to run with UNIX-like operating systems. ...
Steffen Uebe, Francesca Pasutto, Mandy Krumbiegel,...