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» Clustering Genes Using Heterogeneous Data Sources
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SPAA
2012
ACM
13 years 5 months ago
A scalable framework for heterogeneous GPU-based clusters
GPU-based heterogeneous clusters continue to draw attention from vendors and HPC users due to their high energy efficiency and much improved single-node computational performance...
Fengguang Song, Jack Dongarra
JODS
2006
131views Data Mining» more  JODS 2006»
15 years 2 months ago
Integrating and Exchanging XML Data Using Ontologies
While providing a uniform syntax and a semistructured data model, XML does not express semantics but only structure such as nesting information. In this paper, we consider the prob...
Huiyong Xiao, Isabel F. Cruz
BMCBI
2006
95views more  BMCBI 2006»
15 years 2 months ago
XcisClique: analysis of regulatory bicliques
Background: Modeling of cis-elements or regulatory motifs in promoter (upstream) regions of genes is a challenging computational problem. In this work, set of regulatory motifs si...
Amrita Pati, Cecilia Vasquez-Robinet, Lenwood S. H...
PDPTA
2010
15 years 22 days ago
Collecting Sensor Data for High-Performance Computing: A Case-study
- Many research questions remain open with regard to improving reliability in exascale systems. Among others, statistics-based analysis has been used to find anomalies, to isolate ...
Line C. Pouchard, Jonathan D. Dobson, Stephen W. P...
EDBT
2008
ACM
166views Database» more  EDBT 2008»
16 years 3 months ago
OrthoCluster: a new tool for mining synteny blocks and applications in comparative genomics
By comparing genomes among both closely and distally related species, comparative genomics analysis characterizes structures and functions of different genomes in both conserved a...
Xinghuo Zeng, Matthew J. Nesbitt, Jian Pei, Ke Wan...