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» Clustering Genes Using Heterogeneous Data Sources
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CCGRID
2007
IEEE
15 years 9 months ago
A Service-Oriented System to Support Data Integration on Data Grids
Data Grids provide transparent access to heterogeneous and autonomous data resources. The main contribution of this paper is the presentation of a data sharing system that (i) is ...
Anastasios Gounaris, Carmela Comito, Rizos Sakella...
BMCBI
2004
126views more  BMCBI 2004»
15 years 2 months ago
Visualization and analysis of microarray and gene ontology data with treemaps
Background: The increasing complexity of genomic data presents several challenges for biologists. Limited computer monitor views of data complexity and the dynamic nature of data ...
Eric H. Baehrecke, Niem Dang, Ketan Babaria, Ben S...
BMCBI
2006
108views more  BMCBI 2006»
15 years 3 months ago
Gene function classification using Bayesian models with hierarchy-based priors
We investigate the application of hierarchical classification schemes to the annotation of gene function based on several characteristics of protein sequences including phylogenic ...
Babak Shahbaba, Radford M. Neal
BMCBI
2006
106views more  BMCBI 2006»
15 years 3 months ago
Gene and protein nomenclature in public databases
Background: Frequently, several alternative names are in use for biological objects such as genes and proteins. Applications like manual literature search, automated text-mining, ...
Katrin Fundel, Ralf Zimmer
JCB
2006
129views more  JCB 2006»
15 years 2 months ago
GenRate: A Generative Model that Reveals Novel Transcripts in Genome-Tiling Microarray Data
Genome-wide microarray designs containing millions to hundreds of millions of probes are available for a variety of mammals, including mouse and human. These genome tiling arrays ...
Brendan J. Frey, Quaid Morris, Timothy R. Hughes