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» Clustering by pattern similarity in large data sets
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BMCBI
2008
83views more  BMCBI 2008»
14 years 9 months ago
Models of deletion for visualizing bacterial variation: an application to tuberculosis spoligotypes
Background: Molecular typing methods are commonly used to study genetic relationships among bacterial isolates. Many of these methods have become standardized and produce portable...
Josephine F. Reyes, Andrew R. Francis, Mark M. Tan...
BMCBI
2006
126views more  BMCBI 2006»
14 years 9 months ago
OpWise: Operons aid the identification of differentially expressed genes in bacterial microarray experiments
Background: Differentially expressed genes are typically identified by analyzing the variation between replicate measurements. These procedures implicitly assume that there are no...
Morgan N. Price, Adam P. Arkin, Eric J. Alm
BMCBI
2006
82views more  BMCBI 2006»
14 years 9 months ago
Prediction of a key role of motifs binding E2F and NR2F in down-regulation of numerous genes during the development of the mouse
Background: We previously demonstrated that gene expression profiles during neuronal differentiation in vitro and hippocampal development in vivo were very similar, due to a conse...
Michal Dabrowski, Stein Aerts, Bozena Kaminska
CIKM
2007
Springer
15 years 3 months ago
Improving the classification of newsgroup messages through social network analysis
Newsgroup participants interact with their communities through conversation threads. They may respond to a message to answer a question, debate a topic, support or disagree with a...
Blaz Fortuna, Eduarda Mendes Rodrigues, Natasa Mil...
KDD
2004
ACM
134views Data Mining» more  KDD 2004»
15 years 10 months ago
Exploiting a support-based upper bound of Pearson's correlation coefficient for efficiently identifying strongly correlated pair
Given a user-specified minimum correlation threshold and a market basket database with N items and T transactions, an all-strong-pairs correlation query finds all item pairs with...
Hui Xiong, Shashi Shekhar, Pang-Ning Tan, Vipin Ku...