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» Clustering gene expression patterns
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BMCBI
2007
126views more  BMCBI 2007»
14 years 10 months ago
Comparison of gene expression profiles altered by comfrey and riddelliine in rat liver
Background: Comfrey (Symphytum officinale) is a perennial plant and has been consumed by humans as a vegetable, a tea and an herbal medicine for more than 2000 years. It, however,...
Lei Guo, Nan Mei, Stacey L. Dial, James C. Fuscoe,...
BMCBI
2006
126views more  BMCBI 2006»
14 years 10 months ago
OpWise: Operons aid the identification of differentially expressed genes in bacterial microarray experiments
Background: Differentially expressed genes are typically identified by analyzing the variation between replicate measurements. These procedures implicitly assume that there are no...
Morgan N. Price, Adam P. Arkin, Eric J. Alm
NIPS
2008
14 years 11 months ago
A mixture model for the evolution of gene expression in non-homogeneous datasets
We address the challenge of assessing conservation of gene expression in complex, non-homogeneous datasets. Recent studies have demonstrated the success of probabilistic models in...
Gerald Quon, Yee Whye Teh, Esther Chan, Timothy R....
CLEIEJ
2007
152views more  CLEIEJ 2007»
14 years 10 months ago
Gene Expression Analysis using Markov Chains extracted from RNNs
Abstract. This paper present a new approach for the analysis of gene expression, by extracting a Markov Chain from trained Recurrent Neural Networks (RNNs). A lot of microarray dat...
Igor Lorenzato Almeida, Denise Regina Pechmann Sim...
JUCS
2007
118views more  JUCS 2007»
14 years 9 months ago
A Model of Immune Gene Expression Programming for Rule Mining
: Rule mining is an important issue in data mining. To address it, a novel Immune Gene Expression Programming (IGEP) model was proposed. Concepts of rule, gene, immune cell, and an...
Tao Zeng, Changjie Tang, Yong Xiang, Peng Chen, Yi...