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» Clustering techniques for protein surfaces
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BIBE
2005
IEEE
154views Bioinformatics» more  BIBE 2005»
15 years 5 months ago
Effective Pre-Processing Strategies for Functional Clustering of a Protein-Protein Interactions Network
In this article we present novel preprocessing techniques, based on topological measures of the network, to identify clusters of proteins from Protein-protein interaction (PPI) ne...
Duygu Ucar, Srinivasan Parthasarathy, Sitaram Asur...
NAR
2011
191views Computer Vision» more  NAR 2011»
14 years 2 months ago
The protein common interface database (ProtCID) - a comprehensive database of interactions of homologous proteins in multiple cr
The protein common interface database (ProtCID) is a database that contains clusters of similar homodimeric and heterodimeric interfaces observed in multiple crystal forms (CFs). ...
Qifang Xu, Roland L. Dunbrack Jr.
95
Voted
PAA
2006
14 years 11 months ago
Efficient median based clustering and classification techniques for protein sequences
Abstract In this paper, an efficient K-medians clustering (unsupervised) algorithm for prototype selection and Supervised K-medians (SKM) classification technique for protein seque...
P. A. Vijaya, M. Narasimha Murty, D. K. Subramania...
CSB
2004
IEEE
116views Bioinformatics» more  CSB 2004»
15 years 3 months ago
In-Silico Prediction of Surface Residue Clusters for Enzyme-Substrate Specificity
One of the most remarkable properties of enzyme-substrate binding is the high substrate specificity among homologous enzymes. Identification of regions in enzymes that play an imp...
Gong-Xin Yu, Byung-Hoon Park, Praveen Chandramohan...
JIB
2006
102views more  JIB 2006»
14 years 11 months ago
3D image and graph based Computation of Protein Surface
The accessible surface of a macromolecule is a significant determinant of its action. The interaction between biomolecules or protein-ligand is dependent on their surfaces rather ...
A. Ranganath, K. C. Shet, N. Vidyavathi