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BMCBI
2007
162views more  BMCBI 2007»
15 years 3 months ago
Three-Dimensional Phylogeny Explorer: Distinguishing paralogs, lateral transfer, and violation of "molecular clock" assumption w
Background: Construction and interpretation of phylogenetic trees has been a major research topic for understanding the evolution of genes. Increases in sequence data and complexi...
Namshin Kim, Christopher Lee
CGF
2010
189views more  CGF 2010»
15 years 3 months ago
Space-in-Time and Time-in-Space Self-Organizing Maps for Exploring Spatiotemporal Patterns
Spatiotemporal data pose serious challenges to analysts in geographic and other domains. Owing to the complexity of the geospatial and temporal components, this kind of data canno...
Gennady L. Andrienko, Natalia V. Andrienko, Sebast...
BMCBI
2007
202views more  BMCBI 2007»
15 years 3 months ago
ProtNet: a tool for stochastic simulations of protein interaction networks dynamics
Background: Protein interactions support cell organization and mediate its response to any specific stimulus. Recent technological advances have produced large data-sets that aim ...
Massimo Bernaschi, Filippo Castiglione, Alessandra...
IJON
2007
90views more  IJON 2007»
15 years 3 months ago
Spatially organized spike correlation in cat visual cortex
Inspired by optical recordings from visual cortex which show maps of orientation selectivity, and the finding that very similar patterns of population activity occur when the neu...
Denise Berger, David Warren, Richard Normann, Amos...
BMCBI
2005
147views more  BMCBI 2005»
15 years 3 months ago
GATA: a graphic alignment tool for comparative sequence analysis
Background: Several problems exist with current methods used to align DNA sequences for comparative sequence analysis. Most dynamic programming algorithms assume that conserved se...
David A. Nix, Michael B. Eisen