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    BMCBI
    2007
    102views more  BMCBI 2007»
    Identification of homologs in insignificant blast hits by exploiting extrinsic gene properties
    14 years 9 months ago
    Identification of homologs in insignificant blast hits by exploiting extrinsic gene properties
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    Background: Homology is a key concept in both evolutionary biology and genomics. Detection of homology is crucial in fields like the functional annotation of protein sequences and...
    Jos Boekhorst, Berend Snel
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    BMCBI
    2008
    323views more  BMCBI 2008»
    A compatible exon-exon junction database for the identification of exon skipping events using tandem mass spectrum data
    14 years 9 months ago
    A compatible exon-exon junction database for the identification of exon skipping events using tandem mass spectrum data
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    Background: Alternative splicing is an important gene regulation mechanism. It is estimated that about 74% of multi-exon human genes have alternative splicing. High throughput tan...
    Fan Mo, Xu Hong, Feng Gao, Lin Du, Jun Wang, Gilbe...
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    BMCBI
    2007
    176views more  BMCBI 2007»
    Correlation-maximizing surrogate gene space for visual mining of gene expression patterns in developing barley endosperm tissue
    14 years 9 months ago
    Correlation-maximizing surrogate gene space for visual mining of gene expression patterns in developing barley endosperm tissue
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    Background: Micro- and macroarray technologies help acquire thousands of gene expression patterns covering important biological processes during plant ontogeny. Particularly, fait...
    Marc Strickert, Nese Sreenivasulu, Björn Usad...
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    BMCBI
    2008
    170views more  BMCBI 2008»
    Evaluation of GO-based functional similarity measures using S. cerevisiae protein interaction and expression profile data
    14 years 9 months ago
    Evaluation of GO-based functional similarity measures using S. cerevisiae protein interaction and expression profile data
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    Background: Researchers interested in analysing the expression patterns of functionally related genes usually hope to improve the accuracy of their results beyond the boundaries o...
    Tao Xu, LinFang Du, Yan Zhou
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    BMCBI
    2008
    164views more  BMCBI 2008»
    Word correlation matrices for protein sequence analysis and remote homology detection
    14 years 9 months ago
    Word correlation matrices for protein sequence analysis and remote homology detection
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    Background: Classification of protein sequences is a central problem in computational biology. Currently, among computational methods discriminative kernel-based approaches provid...
    Thomas Lingner, Peter Meinicke
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