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BMCBI
2010
139views more  BMCBI 2010»
14 years 11 months ago
PoGO: Prediction of Gene Ontology terms for fungal proteins
Background: Automated protein function prediction methods are the only practical approach for assigning functions to genes obtained from model organisms. Many of the previously re...
Jaehee Jung, Gangman Yi, Serenella A. Sukno, Micha...
ACL
2008
15 years 17 days ago
Ad Hoc Treebank Structures
We outline the problem of ad hoc rules in treebanks, rules used for specific constructions in one data set and unlikely to be used again. These include ungeneralizable rules, erro...
Markus Dickinson
BMCBI
2007
96views more  BMCBI 2007»
14 years 11 months ago
Protein subcellular localization prediction based on compartment-specific features and structure conservation
Motivation: Protein subcellular localization is crucial for genome annotation, protein function prediction, and drug discovery. However, since determining subcellular localization...
Emily Chia-Yu Su, Hua-Sheng Chiu, Allan Lo, Jenn-K...
CIKM
2009
Springer
15 years 5 months ago
Effective and efficient structured retrieval
Search engines that support structured documents typically support structure created by the author (e.g., title, section), and may also support structure added by an annotation pr...
Le Zhao, Jamie Callan
BMCBI
2011
14 years 2 months ago
Dissecting protein loops with a statistical scalpel suggests a functional implication of some structural motifs
Background: One of the strategies for protein function annotation is to search particular structural motifs that are known to be shared by proteins with a given function. Results:...
Leslie Regad, Juliette Martin, Anne-Claude Camprou...