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BMCBI
2011
14 years 6 months ago
R2R - software to speed the depiction of aesthetic consensus RNA secondary structures
Background: With continuing identification of novel structured noncoding RNAs, there is an increasing need to create schematic diagrams showing the consensus features of these mol...
Zasha Weinberg, Ronald R. Breaker
ESOP
2009
Springer
15 years 6 months ago
Amortised Memory Analysis Using the Depth of Data Structures
Hofmann and Jost have presented a heap space analysis [1] that finds linear space bounds for many functional programs. It uses an amortised analysis: assigning hypothetical amount...
Brian Campbell
CIKM
2009
Springer
15 years 5 months ago
The impact of document structure on keyphrase extraction
Keyphrases are short phrases that reflect the main topic of a document. Because manually annotating documents with keyphrases is a time-consuming process, several automatic appro...
Katja Hofmann, Manos Tsagkias, Edgar Meij, Maarten...
BMCBI
2010
112views more  BMCBI 2010»
14 years 11 months ago
PhenoFam-gene set enrichment analysis through protein structural information
Background: With the current technological advances in high-throughput biology, the necessity to develop tools that help to analyse the massive amount of data being generated is e...
Maciej Paszkowski-Rogacz, Mikolaj Slabicki, M. Ter...
BMCBI
2007
113views more  BMCBI 2007»
14 years 11 months ago
Hinge Atlas: relating protein sequence to sites of structural flexibility
Background: Relating features of protein sequences to structural hinges is important for identifying domain boundaries, understanding structure-function relationships, and designi...
Samuel Flores, Long J. Lu, Julie Yang, Nicholas Ca...