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NAR
2007
90views more  NAR 2007»
14 years 10 months ago
The SUPERFAMILY database in 2007: families and functions
The SUPERFAMILY database provides protein domain assignments, at the SCOP ‘superfamily’ level, for the predicted protein sequences in over 400 completed genomes. A superfamily...
Derek Wilson, Martin Madera, Christine Vogel, Cyru...
PLDI
2010
ACM
15 years 8 months ago
A Context-free Markup Language for Semi-structured Text
An ad hoc data format is any non-standard, semi-structured data format for which robust data processing tools are not available. In this paper, we present ANNE, a new kind of mark...
Qian Xi, David Walker
AMKM
2003
Springer
15 years 4 months ago
Integrating External Sources in a Corporate Semantic Web Managed by a Multi-agent System
We first describe a multi-agent system managing a corporate memory in the form of a corporate semantic web. We then focus on a newly introduced society of agents in charge of wrap...
Tuan-Dung Cao, Fabien Gandon
ECOOP
2007
Springer
15 years 3 months ago
Synchronizing Refactored UML Class Diagrams and OCL Constraints
UML class diagrams are usually annotated with OCL expressions that constrain their possible instantiation. In our work we have investigated how OCL annotations can be automatically...
Slavisa Markovic, Thomas Baar
BMCBI
2010
141views more  BMCBI 2010»
14 years 11 months ago
BioPhysConnectoR: Connecting Sequence Information and Biophysical Models
Background: One of the most challenging aspects of biomolecular systems is the understanding of the coevolution in and among the molecule(s). A complete, theoretical picture of th...
Franziska Hoffgaard, Philipp Weil, Kay Hamacher