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BMCBI
2008
130views more  BMCBI 2008»
15 years 3 months ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen
BMCBI
2008
204views more  BMCBI 2008»
15 years 3 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...
BIB
2006
169views more  BIB 2006»
15 years 2 months ago
Bio-ontologies: current trends and future directions
: In recent years, as a knowledge-based discipline, bioinformatics has moved to make its knowledge more computationally amenable. After its beginnings in the disciplines as a techn...
Olivier Bodenreider, Robert Stevens
BMCBI
2006
120views more  BMCBI 2006»
15 years 2 months ago
SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces
Background: Currently there is a strong need for methods that help to obtain an accurate description of protein interfaces in order to be able to understand the principles that go...
Joan Teyra, Andreas Doms, Michael Schroeder, M. Te...
ENTCS
2006
183views more  ENTCS 2006»
15 years 2 months ago
Metamodel-Based Model Transformation with Aspect-Oriented Constraints
Model transformation means converting an input model available at the beginning of the transformation process to an output model. A widely used approach to model transformation us...
László Lengyel, Tihamer Levendovszky...