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RECOMB
2006
Springer
15 years 10 months ago
RNA Secondary Structure Prediction Via Energy Density Minimization
Abstract. There is a resurgence of interest in RNA secondary structure prediction problem (a.k.a. the RNA folding problem) due to the discovery of many new families of non-coding R...
Can Alkan, Emre Karakoç, Süleyman Cenk...
RECOMB
2006
Springer
15 years 10 months ago
Efficient Enumeration of Phylogenetically Informative Substrings
We study the problem of enumerating substrings that are common amongst genomes that share evolutionary descent. For example, one might want to enumerate all identical (therefore co...
Stanislav Angelov, Boulos Harb, Sampath Kannan, Sa...
VLDB
2003
ACM
147views Database» more  VLDB 2003»
15 years 10 months ago
RE-tree: an efficient index structure for regular expressions
Due to their expressive power, Regular Expressions (REs) are quickly becoming an integral part of language specifications for several important application scenarios. Many of thes...
Chee Yong Chan, Minos N. Garofalakis, Rajeev Rasto...
VLDB
2004
ACM
104views Database» more  VLDB 2004»
15 years 10 months ago
Retrieval effectiveness of an ontology-based model for information selection
Technology in the field of digital media generates huge amounts of nontextual information, audio, video, and images, along with more familiar textual information. The potential for...
Latifur Khan, Dennis McLeod, Eduard H. Hovy
VLDB
2007
ACM
198views Database» more  VLDB 2007»
15 years 10 months ago
The End of an Architectural Era (It's Time for a Complete Rewrite)
In previous papers [SC05, SBC+07], some of us predicted the end of "one size fits all" as a commercial relational DBMS paradigm. These papers presented reasons and exper...
Michael Stonebraker, Samuel Madden, Daniel J. Abad...