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» Columba: an integrated database of proteins, structures, and...
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BMCBI
2006
150views more  BMCBI 2006»
14 years 9 months ago
Cluster analysis of protein array results via similarity of Gene Ontology annotation
Background: With the advent of high-throughput proteomic experiments such as arrays of purified proteins comes the need to analyse sets of proteins as an ensemble, as opposed to t...
Cheryl Wolting, C. Jane McGlade, David Tritchler
110
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NAR
2011
225views Computer Vision» more  NAR 2011»
14 years 10 days ago
IsoBase: a database of functionally related proteins across PPI networks
We describe IsoBase, a database identifying functionally related proteins, across five major eukaryotic model organisms: Saccharomyces cerevisiae, Drosophila melanogaster, Caenorh...
Daniel Park, Rohit Singh, Michael Baym, Chung-Shou...
NAR
2011
162views Computer Vision» more  NAR 2011»
14 years 10 days ago
GlycomeDB - a unified database for carbohydrate structures
GlycomeDB integrates the structural and taxonomic data of all major public carbohydrate databases, as well as carbohydrates contained in the Protein Data Bank, which renders the d...
René Ranzinger, Stephan Herget, Claus-Wilhe...
88
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NAR
2008
107views more  NAR 2008»
14 years 9 months ago
ISPIDER Central: an integrated database web-server for proteomics
Despite the growing volumes of proteomic data, integration of the underlying results remains problematic owing to differences in formats, data captured, protein accessions and ser...
Jennifer A. Siepen, Khalid Belhajjame, Julian N. S...
NAR
2011
241views Computer Vision» more  NAR 2011»
14 years 4 months ago
PRIDB: a protein-RNA interface database
The Protein–RNA Interface Database (PRIDB) is a comprehensive database of protein–RNA interfaces extracted from complexes in the Protein Data Bank (PDB). It is designed to fac...
Benjamin A. Lewis, Rasna R. Walia, Michael Terribi...