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BMCBI
2004
125views more  BMCBI 2004»
14 years 11 months ago
A functional hierarchical organization of the protein sequence space
Background: It is a major challenge of computational biology to provide a comprehensive functional classification of all known proteins. Most existing methods seek recurrent patte...
Noam Kaplan, Moriah Friedlich, Menachem Fromer, Mi...
JBI
2008
137views Bioinformatics» more  JBI 2008»
14 years 11 months ago
Mining sequential patterns for protein fold recognition
Protein data contain discriminative patterns that can be used in many beneficial applications if they are defined correctly. In this work sequential pattern mining (SPM) is utiliz...
Themis P. Exarchos, Costas Papaloukas, Christos La...
DEXAW
2006
IEEE
164views Database» more  DEXAW 2006»
15 years 1 months ago
A P2P Integration Architecture for Protein Resources
The availability of a direct pathway from a primary sequence (denovo or DNA derived) to macromolecular structure to biological function using computer-based tools is the ultimate ...
Kajal T. Claypool, Sanjay Kumar Madria
APBC
2004
126views Bioinformatics» more  APBC 2004»
15 years 1 months ago
Informative 3D Visualization of Multiple Protein Structures
With the continued growth of three dimensional structural information databases comes a corresponding increase in interest in this data for the study of new sequences and an ever-...
Paulo Lai, Warren Kaplan, W. Bret Church, Raymond ...
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NAR
2006
74views more  NAR 2006»
14 years 11 months ago
NOPdb: Nucleolar Proteome Database
The Nucleolar Proteome Database (NOPdb) archives data on .700 proteins that were identified by multiple mass spectrometry (MS) analyses from highly purified preparations of human ...
Anthony Kar Lun Leung, Laura Trinkle-Mulcahy, Yun ...