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» Columba: an integrated database of proteins, structures, and...
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NAR
2011
159views Computer Vision» more  NAR 2011»
14 years 2 months ago
SuperSweet - a resource on natural and artificial sweetening agents
A vast number of sweet tasting molecules are known, encompassing small compounds, carbohydrates, D-amino acids and large proteins. Carbohydrates play a particularly big role in hu...
Jessica Ahmed, Saskia Preissner, Mathias Dunkel, C...
BMCBI
2008
164views more  BMCBI 2008»
14 years 12 months ago
Word correlation matrices for protein sequence analysis and remote homology detection
Background: Classification of protein sequences is a central problem in computational biology. Currently, among computational methods discriminative kernel-based approaches provid...
Thomas Lingner, Peter Meinicke
RECOMB
2008
Springer
16 years 2 days ago
BayCis: A Bayesian Hierarchical HMM for Cis-Regulatory Module Decoding in Metazoan Genomes
The transcriptional regulatory sequences in metazoan genomes often consist of multiple cis-regulatory modules (CRMs). Each CRM contains locally enriched occurrences of binding site...
Tien-ho Lin, Pradipta Ray, Geir Kjetil Sandve, Sel...
BMCBI
2006
115views more  BMCBI 2006»
14 years 11 months ago
MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa
Background: Mitochondria are sub-cellular organelles that have a central role in energy production and in other metabolic pathways of all eukaryotic respiring cells. In the last f...
Domenico Catalano, Flavio Licciulli, Antonio Turi,...
MTSR
2007
Springer
15 years 5 months ago
Creating and Querying an Integrated Ontology for Molecular and Phenotypic Cereals Data
In this paper we describe the development of an ontology of molecular and phenotypic cereals data, realized by integrating existing public web databases with the database developed...
Sonia Bergamaschi, Antonio Sala 0002