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» Combinatorial Pattern Matching
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112
Voted
KDD
2003
ACM
190views Data Mining» more  KDD 2003»
16 years 1 months ago
Distance-enhanced association rules for gene expression
We introduce a novel data mining technique for the analysis of gene expression. Gene expression is the effective production of the protein that a gene encodes. We focus on the cha...
Aleksandar Icev, Carolina Ruiz, Elizabeth F. Ryder
131
Voted
MM
2010
ACM
169views Multimedia» more  MM 2010»
15 years 1 months ago
CO3 for ultra-fast and accurate interactive segmentation
This paper presents an interactive image segmentation framework which is ultra-fast and accurate. Our framework, termed "CO3", consists of three components: COupled repr...
Yibiao Zhao, Song Chun Zhu, Siwei Luo
BMCBI
2007
141views more  BMCBI 2007»
15 years 27 days ago
HeliCis: a DNA motif discovery tool for colocalized motif pairs with periodic spacing
Background: Correct temporal and spatial gene expression during metazoan development relies on combinatorial interactions between different transcription factors. As a consequence...
Erik Larsson, Per Lindahl, Petter Mostad
101
Voted
BMCBI
2008
105views more  BMCBI 2008»
15 years 27 days ago
SIGMA2: A system for the integrative genomic multi-dimensional analysis of cancer genomes, epigenomes, and transcriptomes
Background: High throughput microarray technologies have afforded the investigation of genomes, epigenomes, and transcriptomes at unprecedented resolution. However, software packa...
Raj Chari, Bradley P. Coe, Craig Wedseltoft, Marie...
BMCBI
2006
165views more  BMCBI 2006»
15 years 25 days ago
Validation and functional annotation of expression-based clusters based on gene ontology
Background: The biological interpretation of large-scale gene expression data is one of the paramount challenges in current bioinformatics. In particular, placing the results in t...
Ralf Steuer, Peter Humburg, Joachim Selbig