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» Combinatorics of Periods in Strings
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CPM
2005
Springer
109views Combinatorics» more  CPM 2005»
15 years 3 months ago
Using PQ Trees for Comparative Genomics
Permutations on strings representing gene clusters on genomes have been studied earlier in [18, 14, 3, 12, 17] and the idea of a maximal permutation pattern was introduced in [12]....
Gad M. Landau, Laxmi Parida, Oren Weimann
GECCO
2006
Springer
163views Optimization» more  GECCO 2006»
15 years 1 months ago
The quadratic multiple knapsack problem and three heuristic approaches to it
The quadratic multiple knapsack problem extends the quadratic knapsack problem with K knapsacks, each with its own capacity Ck. A greedy heuristic fills the knapsacks one at a tim...
Amanda Hiley, Bryant A. Julstrom
STOC
2005
ACM
147views Algorithms» more  STOC 2005»
15 years 10 months ago
Simulating independence: new constructions of condensers, ramsey graphs, dispersers, and extractors
We present new explicit constructions of deterministic randomness extractors, dispersers and related objects. We say that a distribution X on binary strings of length n is a -sour...
Boaz Barak, Guy Kindler, Ronen Shaltiel, Benny Sud...
CPM
2000
Springer
177views Combinatorics» more  CPM 2000»
15 years 2 months ago
Identifying and Filtering Near-Duplicate Documents
Abstract. The mathematical concept of document resemblance captures well the informal notion of syntactic similarity. The resemblance can be estimated using a fixed size “sketch...
Andrei Z. Broder
CPM
2006
Springer
125views Combinatorics» more  CPM 2006»
15 years 1 months ago
Geometric Suffix Tree: A New Index Structure for Protein 3-D Structures
Abstract. Protein structure analysis is one of the most important research issues in the post-genomic era, and faster and more accurate query data structures for such 3-D structure...
Tetsuo Shibuya