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» Combinatorics of Periods in Strings
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CPM
2000
Springer
145views Combinatorics» more  CPM 2000»
15 years 4 months ago
Boyer-Moore String Matching over Ziv-Lempel Compressed Text
We present a Boyer-Moore approach to string matching over LZ78 and LZW compressed text. The key idea is that, despite that we cannot exactly choose which text characters to inspect...
Gonzalo Navarro, Jorma Tarhio
CPM
2000
Springer
175views Combinatorics» more  CPM 2000»
15 years 4 months ago
Approximate String Matching over Ziv-Lempel Compressed Text
Abstract. We present a solution to the problem of performing approximate pattern matching on compressed text. The format we choose is the Ziv-Lempel family, speci cally the LZ78 an...
Juha Kärkkäinen, Gonzalo Navarro, Esko U...
CPM
2006
Springer
176views Combinatorics» more  CPM 2006»
15 years 3 months ago
Longest Common Subsequences in Permutations and Maximum Cliques in Circle Graphs
For two strings a, b, the longest common subsequence (LCS) problem consists in comparing a and b by computing the length of their LCS. In a previous paper, we defined a generalisat...
Alexandre Tiskin
APPROX
2005
Springer
94views Algorithms» more  APPROX 2005»
15 years 5 months ago
Testing Periodicity
A string α ∈ Σn is called p-periodic, if for every i, j ∈ {1, . . . , n}, such that i ≡ j mod p, αi = αj, where αi is the i-th place of α. A string α ∈ Σn is said t...
Oded Lachish, Ilan Newman
GECCO
2006
Springer
282views Optimization» more  GECCO 2006»
15 years 3 months ago
A genetic algorithm for the longest common subsequence problem
A genetic algorithm for the longest common subsequence problem encodes candidate sequences as binary strings that indicate subsequences of the shortest or first string. Its fitnes...
Brenda Hinkemeyer, Bryant A. Julstrom