In an undirected, 2-node connected graph G = (V, E) with positive real edge lengths, the distance between any two nodes r and s is the length of a shortest path between r and s in ...
We present a solution for the following problem. Given two sequences X = x1x2 · · · xn and Y = y1y2 · · · ym, n ≤ m, find the best scoring alignment of X = Xk [i] vs Y ove...
Abstract. Compressed pattern matching is one of the most active topics in string matching. The goal is to find all occurrences of a pattern in a compressed text without decompress...
Abstract. We consider the sequence comparison problem, also known as “hidden pattern” problem, where one searches for a given subsequence in a text (rather than a string unders...
Philippe Flajolet, Yves Guivarc'h, Wojciech Szpank...
The syntenic dista nce between two species is the minimum number of fusions, fissions, and translocations required to transform one genome into the other. The linear syntenic dis...