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BMCBI
2011
14 years 4 months ago
Flexible taxonomic assignment of ambiguous sequencing reads
Background: To characterize the diversity of bacterial populations in metagenomic studies, sequencing reads need to be accurately assigned to taxonomic units in a given reference ...
José Carlos Clemente, Jesper Jansson, Gabri...
BMCBI
2011
14 years 4 months ago
Taxon ordering in phylogenetic trees: a workbench test
Background: Phylogenetic trees are an important tool for representing evolutionary relationships among organisms. In a phylogram or chronogram, the ordering of taxa is not conside...
Francesco Cerutti, Luigi Bertolotti, Tony L. Goldb...
BMCBI
2011
14 years 4 months ago
Statistical Test of Expression Pattern (STEPath): a new strategy to integrate gene expression data with genomic information in i
Background: In the last decades, microarray technology has spread, leading to a dramatic increase of publicly available datasets. The first statistical tools developed were focuse...
Paolo G. V. Martini, Davide Risso, Gabriele Sales,...
CCR
2011
14 years 4 months ago
Measured impact of crooked traceroute
Data collected using traceroute-based algorithms underpins research into the Internet’s router-level topology, though it is possible to infer false links from this data. One sou...
Matthew J. Luckie, Amogh Dhamdhere, kc claffy, Dav...
ECCC
2011
207views ECommerce» more  ECCC 2011»
14 years 4 months ago
Balls and Bins: Smaller Hash Families and Faster Evaluation
A fundamental fact in the analysis of randomized algorithm is that when n balls are hashed into n bins independently and uniformly at random, with high probability each bin contai...
L. Elisa Celis, Omer Reingold, Gil Segev, Udi Wied...
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