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BMCBI
2007
147views more  BMCBI 2007»
14 years 9 months ago
Hon-yaku: a biology-driven Bayesian methodology for identifying translation initiation sites in prokaryotes
Background: Computational prediction methods are currently used to identify genes in prokaryote genomes. However, identification of the correct translation initiation sites remain...
Yuko Makita, Michiel J. L. de Hoon, Antoine Danchi...
ICML
2004
IEEE
15 years 10 months ago
Dynamic conditional random fields: factorized probabilistic models for labeling and segmenting sequence data
In sequence modeling, we often wish to represent complex interaction between labels, such as when performing multiple, cascaded labeling tasks on the same sequence, or when longra...
Charles A. Sutton, Khashayar Rohanimanesh, Andrew ...
ICASSP
2007
IEEE
15 years 3 months ago
Morphological Diversity and Sparse Image Denoising
Overcomplete representations are attracting interest in image processing theory, particularly due to their potential to generate sparse representations of data based on their morp...
Mohamed-Jalal Fadili, Jean-Luc Starck, Larbi Boubc...
RECOMB
2003
Springer
15 years 9 months ago
Modeling dependencies in protein-DNA binding sites
The availability of whole genome sequences and high-throughput genomic assays opens the door for in silico analysis of transcription regulation. This includes methods for discover...
Yoseph Barash, Gal Elidan, Nir Friedman, Tommy Kap...
BMCBI
2010
147views more  BMCBI 2010»
14 years 9 months ago
Learning biological network using mutual information and conditional independence
Background: Biological networks offer us a new way to investigate the interactions among different components and address the biological system as a whole. In this paper, a revers...
Dong-Chul Kim, Xiaoyu Wang, Chin-Rang Yang, Jean G...