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POPL
2008
ACM
15 years 10 months ago
Cyclic proofs of program termination in separation logic
We propose a novel approach to proving the termination of heapmanipulating programs, which combines separation logic with cyclic proof within a Hoare-style proof system. Judgement...
James Brotherston, Richard Bornat, Cristiano Calca...
POPL
2004
ACM
15 years 10 months ago
Atomizer: a dynamic atomicity checker for multithreaded programs
Ensuring the correctness of multithreaded programs is difficult, due to the potential for unexpected interactions between concurrent threads. Much previous work has focused on det...
Cormac Flanagan, Stephen N. Freund
RECOMB
2008
Springer
15 years 10 months ago
Bootstrapping the Interactome: Unsupervised Identification of Protein Complexes in Yeast
Protein interactions and complexes are major components of biological systems. Recent genome-wide applications of tandem affinity purification (TAP) in yeast have increased signifi...
Caroline C. Friedel, Jan Krumsiek, Ralf Zimmer
RECOMB
2005
Springer
15 years 10 months ago
An Interaction-Dependent Model for Transcription Factor Binding
Transcriptional regulation is accomplished by several transcription factor proteins that bind to specific DNA elements in the relative vicinity of the gene, and interact with each ...
Li-San Wang, Shane T. Jensen, Sridhar Hannenhalli
VLDB
2005
ACM
185views Database» more  VLDB 2005»
15 years 10 months ago
Storing and querying XML data using denormalized relational databases
XML database systems emerge as a result of the acceptance of the XML data model. Recent works have followed the promising approach of building XML database management systems on un...
Andrey Balmin, Yannis Papakonstantinou
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