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BIOINFORMATICS
2008
99views more  BIOINFORMATICS 2008»
15 years 13 days ago
Combining statistical alignment and phylogenetic footprinting to detect regulatory elements
Rahul Satija, Lior Pachter, Jotun Hein
BMCBI
2008
118views more  BMCBI 2008»
15 years 13 days ago
Evaluation of phylogenetic footprint discovery for predicting bacterial cis-regulatory elements and revealing their evolution
Background: The detection of conserved motifs in promoters of orthologous genes (phylogenetic footprints) has become a common strategy to predict cis-acting regulatory elements. S...
Rekin's Janky, Jacques van Helden
BMCBI
2007
247views more  BMCBI 2007»
15 years 10 days ago
A survey of DNA motif finding algorithms
Background: Unraveling the mechanisms that regulate gene expression is a major challenge in biology. An important task in this challenge is to identify regulatory elements, especi...
Modan K. Das, Ho-Kwok Dai