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» Comparative Metabolomics of Breast Cancer
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RECOMB
2007
Springer
15 years 10 months ago
Framework for Identifying Common Aberrations in DNA Copy Number Data
High-resolution array comparative genomic hybridization (aCGH) provides exon-level mapping of DNA aberrations in cells or tissues. Such aberrations are central to carcinogenesis an...
Amir Ben-Dor, Doron Lipson, Anya Tsalenko, Mark Re...
BMCBI
2011
14 years 5 months ago
Appearance frequency modulated gene set enrichment testing
Background: Gene set enrichment testing has helped bridge the gap from an individual gene to a systems biology interpretation of microarray data. Although gene sets are defined a ...
Jun Ma, Maureen A. Sartor, H. V. Jagadish
BMCBI
2011
14 years 5 months ago
Meta-analysis of gene expression microarrays with missing replicates
Background: Many different microarray experiments are publicly available today. It is natural to ask whether different experiments for the same phenotypic conditions can be combin...
Fan Shi, Gad Abraham, Christopher Leckie, Izhak Ha...
BMCBI
2007
97views more  BMCBI 2007»
14 years 10 months ago
SIRAC: Supervised Identification of Regions of Aberration in aCGH datasets
Background: Array comparative genome hybridization (aCGH) provides information about genomic aberrations. Alterations in the DNA copy number may cause the cell to malfunction, lea...
Carmen Lai, Hugo M. Horlings, Marc J. van de Vijve...
ISBI
2002
IEEE
15 years 11 months ago
Support vector machine learning for detection of microcalcifications in mammograms
Microcalcification (MC) clusters in mammograms can be an indicator of breast cancer. In this work we propose for the first time the use of support vector machine (SVM) learning fo...
Issam El-Naqa, Yongyi Yang, Miles N. Wernick, Niko...