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IMECS
2007
15 years 2 months ago
Pseudo-Reverse Approach in Genetic Evolution: An Empirical Study with Enzymes
— A pseudo-reverse approach is presented in this paper to analyze the evolutionary behaviour of enzymes. It employs the standard model of Nei and Gojobori [1] in a generalized fo...
Sukanya Manna, Cheng-Yuan Liou
109
Voted
RIVF
2008
15 years 2 months ago
Speeding up subset seed algorithm for intensive protein sequence comparison
Abstract--Sequence similarity search is a common and repeated task in molecular biology. The rapid growth of genomic databases leads to the need of speeding up the treatment of thi...
Van Hoa Nguyen, Dominique Lavenier
100
Voted
BIOCOMP
2006
15 years 2 months ago
Reverse Engineering Approach in Molecular Evolution: Simulation and Case Study with Enzyme Proteins
- We developed a method of reverse engineering to compare the behaviour the enzyme proteins with the existing standard concepts. Our work is based on the strong assumption from the...
Sukanya Manna, Cheng-Yuan Liou
118
Voted
BMCBI
2011
14 years 7 months ago
Ultra-fast sequence clustering from similarity networks with SiLiX
Background: The number of gene sequences that are available for comparative genomics approaches is increasing extremely quickly. A current challenge is to be able to handle this h...
Vincent Miele, Simon Penel, Laurent Duret
ECCV
2002
Springer
16 years 2 months ago
Adaptive Rest Condition Potentials: Second Order Edge-Preserving Regularization
Abstract. The propose of this paper is to introduce a new regularization formulation for inverse problems in computer vision and image processing that allows one to reconstruct sec...
José L. Marroquín, Mariano Rivera