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102
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EVOW
2008
Springer
15 years 2 months ago
Protein Interaction Inference Using Particle Swarm Optimization Algorithm
Many processes in the cell involve interaction among the proteins and determination of the networks of such interactions is of immense importance towards the complete understanding...
Mudassar Iqbal, Alex Alves Freitas, Colin G. Johns...
APBC
2004
163views Bioinformatics» more  APBC 2004»
15 years 1 months ago
A Combined Model and a Varied Gibbs Sampling Algorithm Used for Motif Discovery
The conserved sequences in gene regulatory regions dominate gene regulation. Discovering these sequences and their functions is important in post genome era. A novel model is cons...
Xiaoming Wu, Bo Wang, Changxin Song, Jingzhi Cheng
81
Voted
BIOCOMP
2006
15 years 1 months ago
Evaluation of a Novel Metric for Quality Control in an RNA Interference High Throughput Screening Assay
The application of genome scale RNA interference (RNAi) relies on the development of high quality RNAi high throughput screening (HTS) assays. An important quality control (QC) ch...
Xiaohua Douglas Zhang, Amy S. Espeseth, Namjin Chu...
BNCOD
2003
91views Database» more  BNCOD 2003»
15 years 1 months ago
Persistent Indexing Technology for Large Sequences
There are two aspects to the work being presented here. The first is a novel persistent index structure for genomic data, a prototype of which has been completed. The second, usin...
Robert Japp
98
Voted
SODA
2003
ACM
142views Algorithms» more  SODA 2003»
15 years 1 months ago
The similarity metric
—A new class of distances appropriate for measuring similarity relations between sequences, say one type of similarity per distance, is studied. We propose a new “normalized in...
Ming Li, Xin Chen, Xin Li, Bin Ma, Paul M. B. Vit&...