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» Comparative genome assembly
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119
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TIT
2010
170views Education» more  TIT 2010»
14 years 7 months ago
Belief propagation estimation of protein and domain interactions using the sum-product algorithm
We present a novel framework to estimate protein-protein (PPI) and domain-domain (DDI) interactions based on a belief propagation estimation method that efficiently computes inter...
Faruck Morcos, Marcin Sikora, Mark S. Alber, Dale ...
92
Voted
BMCBI
2006
134views more  BMCBI 2006»
15 years 16 days ago
Application of machine learning in SNP discovery
Background: Single nucleotide polymorphisms (SNP) constitute more than 90% of the genetic variation, and hence can account for most trait differences among individuals in a given ...
Lakshmi K. Matukumalli, John J. Grefenstette, Davi...
179
Voted
BMCBI
2005
223views more  BMCBI 2005»
15 years 11 days ago
Bioinformatics approaches for cross-species liver cancer analysis based on microarray gene expression profiling
Background: The completion of the sequencing of human, mouse and rat genomes and knowledge of cross-species gene homologies enables studies of differential gene expression in anim...
Hong Fang, Weida Tong, Roger Perkins, Leming M. Sh...
115
Voted
SSDBM
2006
IEEE
156views Database» more  SSDBM 2006»
15 years 6 months ago
On Data and Visualization Models for Signaling Pathways
Signaling pathways are chains of interacting proteins, through which the cell converts a (usually) extracellular signal into a biological response. The number of known signaling p...
Nattakarn Ratprasartporn, Ali Cakmak, Gultekin &Ou...
114
Voted
HPCC
2009
Springer
15 years 5 months ago
On Instruction-Level Method for Reducing Cache Penalties in Embedded VLIW Processors
Usual cache optimisation techniques for high performance computing are difficult to apply in embedded VLIW applications. First, embedded applications are not always well structur...
Samir Ammenouche, Sid Ahmed Ali Touati, William Ja...