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RECOMB
2010
Springer
15 years 2 months ago
naiveBayesCall: An Efficient Model-Based Base-Calling Algorithm for High-Throughput Sequencing
Immense amounts of raw instrument data (i.e., images of fluorescence) are currently being generated using ultra high-throughput sequencing platforms. An important computational cha...
Wei-Chun Kao, Yun S. Song
114
Voted
SMA
2010
ACM
231views Solid Modeling» more  SMA 2010»
15 years 19 days ago
Fast and robust retrieval of Minkowski sums of rotating convex polyhedra in 3-space
We present a novel method for fast retrieval of exact Minkowski sums of pairs of convex polytopes in R3 , where one of the polytopes keeps rotating. The algorithm is based on pre-...
Naama Mayer, Efi Fogel, Dan Halperin
114
Voted
BMCBI
2010
164views more  BMCBI 2010»
15 years 17 days ago
Investigating the validity of current network analysis on static conglomerate networks by protein network stratification
Background: A molecular network perspective forms the foundation of systems biology. A common practice in analyzing protein-protein interaction (PPI) networks is to perform networ...
Minlu Zhang, Long J. Lu
111
Voted
BMCBI
2007
129views more  BMCBI 2007»
15 years 17 days ago
A novel approach to sequence validating protein expression clones with automated decision making
Background: Whereas the molecular assembly of protein expression clones is readily automated and routinely accomplished in high throughput, sequence verification of these clones i...
Elena Taycher, Andreas Rolfs, Yanhui Hu, Dongmei Z...
99
Voted
BMCBI
2007
152views more  BMCBI 2007»
15 years 17 days ago
Bioinformatic identification of novel putative photoreceptor specific cis-elements
Background: Cell specific gene expression is largely regulated by different combinations of transcription factors that bind cis-elements in the upstream promoter sequence. However...
Charles G. Danko, Vera A. McIlvain, Maochun Qin, B...