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RECOMB
2008
Springer
16 years 28 days ago
DLIGHT - Lateral Gene Transfer Detection Using Pairwise Evolutionary Distances in a Statistical Framework
Abstract. This paper presents an algorithm to detect lateral gene transfer (LGT) on the basis of pairwise evolutionary distances. The prediction is made from a likelihood ratio der...
Christophe Dessimoz, Daniel Margadant, Gaston H. G...
99
Voted
BMCBI
2008
112views more  BMCBI 2008»
15 years 22 days ago
A simplified approach to disulfide connectivity prediction from protein sequences
Background: Prediction of disulfide bridges from protein sequences is useful for characterizing structural and functional properties of proteins. Several methods based on differen...
Marc Vincent, Andrea Passerini, Matthieu Labb&eacu...
CEC
2009
IEEE
15 years 7 months ago
Dynamic optimization using Self-Adaptive Differential Evolution
Abstract— In this paper we investigate a Self-Adaptive Differential Evolution algorithm (jDE) where F and CR control parameters are self-adapted and a multi-population method wit...
Janez Brest, Ales Zamuda, Borko Boskovic, Mirjam S...
95
Voted
GECCO
2007
Springer
164views Optimization» more  GECCO 2007»
15 years 6 months ago
A study of mutational robustness as the product of evolutionary computation
This paper investigates the ability of a tournament selection based genetic algorithm to find mutationally robust solutions to a simple combinatorial optimization problem. Two di...
Justin Schonfeld
122
Voted
BMCBI
2011
14 years 4 months ago
Elastic SCAD as a novel penalization method for SVM classification tasks in high-dimensional data
Background: Classification and variable selection play an important role in knowledge discovery in highdimensional data. Although Support Vector Machine (SVM) algorithms are among...
Natalia Becker, Grischa Toedt, Peter Lichter, Axel...