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» Comparing the Performance of Database Selection Algorithms
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BMCBI
2010
106views more  BMCBI 2010»
15 years 6 months ago
Predicting MHC class I epitopes in large datasets
Background: Experimental screening of large sets of peptides with respect to their MHC binding capabilities is still very demanding due to the large number of possible peptide seq...
Kirsten Roomp, Iris Antes, Thomas Lengauer
BMCBI
2008
173views more  BMCBI 2008»
15 years 6 months ago
Improved machine learning method for analysis of gas phase chemistry of peptides
Background: Accurate peptide identification is important to high-throughput proteomics analyses that use mass spectrometry. Search programs compare fragmentation spectra (MS/MS) o...
Allison Gehrke, Shaojun Sun, Lukasz A. Kurgan, Nat...
DAC
2003
ACM
16 years 7 months ago
Using estimates from behavioral synthesis tools in compiler-directed design space exploration
This paper considers the role of performance and area estimates from behavioral synthesis in design space exploration. We have developed a compilation system that automatically ma...
Byoungro So, Pedro C. Diniz, Mary W. Hall
ICDCS
2010
IEEE
15 years 7 months ago
Minimizing Probing Cost and Achieving Identifiability in Network Link Monitoring
Continuously monitoring the link performance is important to network diagnosis. Recently, active probes sent between end systems are widely used to monitor the link performance. I...
Qiang Zheng, Guohong Cao
174
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BMCBI
2010
176views more  BMCBI 2010»
15 years 6 months ago
TargetSpy: a supervised machine learning approach for microRNA target prediction
Background: Virtually all currently available microRNA target site prediction algorithms require the presence of a (conserved) seed match to the 5' end of the microRNA. Recen...
Martin Sturm, Michael Hackenberg, David Langenberg...