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» Comparing transformation methods for DNA microarray data
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BMCBI
2005
128views more  BMCBI 2005»
15 years 1 months ago
Transformation and other factors of the peptide mass spectrometry pairwise peak-list comparison process
Background: Biological Mass Spectrometry is used to analyse peptides and proteins. A mass spectrum generates a list of measured mass to charge ratios and intensities of ionised pe...
Witold E. Wolski, Maciej Lalowski, Peter Martus, R...
122
Voted
BMCBI
2006
240views more  BMCBI 2006»
15 years 2 months ago
Statistical analysis of real-time PCR data
Background: Even though real-time PCR has been broadly applied in biomedical sciences, data processing procedures for the analysis of quantitative real-time PCR are still lacking;...
Joshua S. Yuan, Ann Reed, Feng Chen, C. Neal Stewa...
BMCBI
2010
139views more  BMCBI 2010»
15 years 2 months ago
A highly efficient multi-core algorithm for clustering extremely large datasets
Background: In recent years, the demand for computational power in computational biology has increased due to rapidly growing data sets from microarray and other high-throughput t...
Johann M. Kraus, Hans A. Kestler
IEAAIE
2009
Springer
15 years 8 months ago
Robust Singular Spectrum Transform
Change Point Discovery is a basic algorithm needed in many time series mining applications including rule discovery, motif discovery, casual analysis, etc. Several techniques for c...
Yasser F. O. Mohammad, Toyoaki Nishida
83
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PLDI
2005
ACM
15 years 7 months ago
Formal loop merging for signal transforms
A critical optimization in the domain of linear signal transforms, such as the discrete Fourier transform (DFT), is loop merging, which increases data locality and reuse and thus ...
Franz Franchetti, Yevgen Voronenko, Markus Pü...