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» Comparing transformation methods for DNA microarray data
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BMCBI
2010
110views more  BMCBI 2010»
15 years 2 months ago
Missing value imputation for epistatic MAPs
Background: Epistatic miniarray profiling (E-MAPs) is a high-throughput approach capable of quantifying aggravating or alleviating genetic interactions between gene pairs. The dat...
Colm Ryan, Derek Greene, Gerard Cagney, Padraig Cu...
BMCBI
2010
172views more  BMCBI 2010»
15 years 2 months ago
Inferring gene regression networks with model trees
Background: Novel strategies are required in order to handle the huge amount of data produced by microarray technologies. To infer gene regulatory networks, the first step is to f...
Isabel A. Nepomuceno-Chamorro, Jesús S. Agu...
BMCBI
2010
81views more  BMCBI 2010»
15 years 1 months ago
Empirical Bayes Analysis of Sequencing-based Transcriptional Profiling without Replicates
Background: Recent technological advancements have made high throughput sequencing an increasingly popular approach for transcriptome analysis. Advantages of sequencing-based tran...
Zhijin Wu, Bethany D. Jenkins, Tatiana A. Rynearso...
NCA
2006
IEEE
15 years 1 months ago
Analysing the localisation sites of proteins through neural networks ensembles
Scientists involved in the area of proteomics are currently seeking integrated, customised and validated research solutions to better expedite their work in proteomics analyses and...
Aristoklis D. Anastasiadis, George D. Magoulas
CEC
2007
IEEE
15 years 6 months ago
Gene selection in cancer classification using PSO/SVM and GA/SVM hybrid algorithms
In this work we compare the use of a Particle Swarm Optimization (PSO) and a Genetic Algorithm (GA) (both augmented with Support Vector Machines SVM) for the classification of high...
Enrique Alba, José García-Nieto, Lae...