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» Comparing transformation methods for DNA microarray data
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BMCBI
2005
130views more  BMCBI 2005»
15 years 2 months ago
Some statistical properties of regulatory DNA sequences, and their use in predicting regulatory regions in the Drosophila genome
Background: This paper addresses the problem of recognising DNA cis-regulatory modules which are located far from genes. Experimental procedures for this are slow and costly, and ...
Irina I. Abnizova, Rene te Boekhorst, Klaudia Walt...
BMCBI
2008
155views more  BMCBI 2008»
15 years 2 months ago
Extending pathways based on gene lists using InterPro domain signatures
Background: High-throughput technologies like functional screens and gene expression analysis produce extended lists of candidate genes. Gene-Set Enrichment Analysis is a commonly...
Florian Hahne, Alexander Mehrle, Dorit Arlt, Annem...
ICIAP
2007
ACM
16 years 2 months ago
A Method for Blur and Similarity Transform Invariant Object Recognition
In this paper, we propose novel blur and similarity transform (i.e. rotation, scaling and translation) invariant features for the recognition of objects in images. The features ar...
Janne Heikkilä, Ville Ojansivu
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BMCBI
2002
195views more  BMCBI 2002»
15 years 2 months ago
Clustering of the SOM easily reveals distinct gene expression patterns: results of a reanalysis of lymphoma study
Background: A method to evaluate and analyze the massive data generated by series of microarray experiments is of utmost importance to reveal the hidden patterns of gene expressio...
Junbai Wang, Jan Delabie, Hans Christian Aasheim, ...
BMCBI
2007
146views more  BMCBI 2007»
15 years 2 months ago
Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...