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» Comparing transformation methods for DNA microarray data
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126
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CGF
2008
142views more  CGF 2008»
15 years 2 months ago
Visualizing Genome Expression and Regulatory Network Dynamics in Genomic and Metabolic Context
DNA microarrays are used to measure the expression levels of thousands of genes simultaneously. In a time series experiment, the gene expressions are measured as a function of tim...
Michel A. Westenberg, Sacha A. F. T. van Hijum, Os...
BMCBI
2006
86views more  BMCBI 2006»
15 years 2 months ago
The impact of sample imbalance on identifying differentially expressed genes
Background: Recently several statistical methods have been proposed to identify genes with differential expression between two conditions. However, very few studies consider the p...
Kun Yang, Jianzhong Li, Hong Gao
BMCBI
2004
181views more  BMCBI 2004»
15 years 2 months ago
Iterative class discovery and feature selection using Minimal Spanning Trees
Background: Clustering is one of the most commonly used methods for discovering hidden structure in microarray gene expression data. Most current methods for clustering samples ar...
Sudhir Varma, Richard Simon
145
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MICCAI
2005
Springer
15 years 7 months ago
Automatic 4-D Registration in Dynamic MR Renography Based on Over-Complete Dyadic Wavelet and Fourier Transforms
Dynamic contrast-enhanced 4-D MR renography has the potential for broad clinical applications, but suffers from respiratory motion that limits analysis and interpretation. Since ea...
Ting Song, Vivian S. Lee, Henry Rusinek, Manmeen K...
PRIB
2009
Springer
147views Bioinformatics» more  PRIB 2009»
15 years 9 months ago
Cross-Platform Analysis with Binarized Gene Expression Data
Abstract. With widespread use of microarray technology as a potential diagnostics tool, the comparison of results obtained from the use of different platforms is of interest. When...
Salih Tuna, Mahesan Niranjan