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» Comparison of Data Structures for Computing Formal Concepts
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IWANN
2009
Springer
15 years 4 months ago
Identifying Gene Ontology Areas for Automated Enrichment
Biomedical ontologies provide a commonly accepted scheme for the characterization of biological concepts that enable knowledge sharing and integration. Updating and maintaining an ...
Catia Pesquita, Tiago Grego, Francisco M. Couto
ICALP
2005
Springer
15 years 3 months ago
Spatial Logics for Bigraphs
Bigraphs are emerging as a (meta-)model for concurrent calculi, like CCS, ambients, πcalculus, and Petri nets. They are built orthogonally on two structures: a hierarchical place...
Giovanni Conforti, Damiano Macedonio, Vladimiro Sa...
SBMF
2009
Springer
105views Formal Methods» more  SBMF 2009»
15 years 4 months ago
Verifying Compiled File System Code
Abstract. This paper presents a case study on retrospective verication of the Linux Virtual File System (VFS), which is aimed at checking for violations of API usage rules and mem...
Jan Tobias Mühlberg, Gerald Lüttgen
BMCBI
2005
137views more  BMCBI 2005»
14 years 9 months ago
A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise
Background: Popular methods to reconstruct molecular phylogenies are based on multiple sequence alignments, in which addition or removal of data may change the resulting tree topo...
Olivier Bastien, Philippe Ortet, Sylvaine Roy, Eri...
SIAMSC
2011
85views more  SIAMSC 2011»
14 years 16 days ago
Refinement and Connectivity Algorithms for Adaptive Discontinuous Galerkin Methods
Abstract. Adaptive multiscale methods are among the many effective techniques for the numerical solution of partial differential equations. Efficient grid management is an import...
Kolja Brix, Ralf Massjung, Alexander Voss