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2001
IEEE
15 years 5 months ago
SOVIA: A User-level Sockets Layer Over Virtual Interface Architecture
The Virtual Interface Architecture (VIA) is an industry standard user-level communication architecture for system area networks. The VIA provides a protected, directlyaccessible i...
Jin-Soo Kim, Kangho Kim, Sung-In Jung
BMCBI
2005
104views more  BMCBI 2005»
15 years 2 months ago
Scoring functions for transcription factor binding site prediction
Background: Transcription factor binding site (TFBS) prediction is a difficult problem, which requires a good scoring function to discriminate between real binding sites and backg...
Markus T. Friberg, Peter von Rohr, Gaston H. Gonne...
134
Voted
BMCBI
2011
14 years 5 months ago
A Novel And Well-Defined Benchmarking Method For Second Generation Read Mapping
Background: Second generation sequencing technologies yield DNA sequence data at ultra high-throughput. Common to most biological applications is a mapping of the reads to an almo...
Manuel Holtgrewe, Anne-Katrin Emde, David Weese, K...
NAR
2007
149views more  NAR 2007»
15 years 1 months ago
UniHI: an entry gate to the human protein interactome
Systematic mapping of protein–protein interactions has become a central task of functional genomics. To map the human interactome, several strategies have recently been pursued....
Gautam Chaurasia, Yasir Iqbal, Christian Häni...
112
Voted
ICS
2000
Tsinghua U.
15 years 5 months ago
Using complete system simulation to characterize SPECjvm98 benchmarks
Complete system simulation to understand the influence of architecture and operating systems on application execution has been identified to be crucial for systems design. While t...
Tao Li, Lizy Kurian John, Narayanan Vijaykrishnan,...