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BMCBI
2008
108views more  BMCBI 2008»
15 years 4 months ago
SPRINT: A new parallel framework for R
Background: Microarray analysis allows the simultaneous measurement of thousands to millions of genes or sequences across tens to thousands of different samples. The analysis of t...
Jon Hill, Matthew Hambley, Thorsten Forster, Murie...
BMCBI
2006
81views more  BMCBI 2006»
15 years 4 months ago
Multipolar representation of protein structure
Background: That the structure determines the function of proteins is a central paradigm in biology. However, protein functions are more directly related to cooperative effects at...
Apostol Gramada, Philip E. Bourne
ECCC
2007
115views more  ECCC 2007»
15 years 3 months ago
A (De)constructive Approach to Program Checking
Program checking, program self-correcting and program selftesting were pioneered by [Blum and Kannan] and [Blum, Luby and Rubinfeld] in the mid eighties as a new way to gain conï¬...
Shafi Goldwasser, Dan Gutfreund, Alexander Healy, ...
BMCBI
2005
115views more  BMCBI 2005»
15 years 3 months ago
Statistical distributions of optimal global alignment scores of random protein sequences
Background: The inference of homology from statistically significant sequence similarity is a central issue in sequence alignments. So far the statistical distribution function un...
Hongxia Pang, Jiaowei Tang, Su-Shing Chen, Shiheng...
BMCBI
2005
246views more  BMCBI 2005»
15 years 3 months ago
ParPEST: a pipeline for EST data analysis based on parallel computing
Background: Expressed Sequence Tags (ESTs) are short and error-prone DNA sequences generated from the 5' and 3' ends of randomly selected cDNA clones. They provide an im...
Nunzio D'Agostino, Mario Aversano, Maria Luisa Chi...