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IPPS
2006
IEEE
15 years 10 months ago
Parallel implementation of a quartet-based algorithm for phylogenetic analysis
This paper describes a parallel implementation of our recently developed algorithm for phylogenetic analysis on the IBM BlueGene/L cluster [15]. This algorithm constructs evolutio...
Bing Bing Zhou, Daniel Chu, Monther Tarawneh, Ping...
IJCNN
2006
IEEE
15 years 10 months ago
A Very Small Chaotic Neural Net
— Previously we have shown that chaos can arise in networks of physically realistic neurons [1], [2]. Those networks contain a moderate to large number of units connected in a sp...
Carlos Lourenco
SIGCOMM
2003
ACM
15 years 9 months ago
Forwarding in a content-based network
This paper presents an algorithm for content-based forwarding, an essential function in content-based networking. Unlike in traditional address-based unicast or multicast networks...
Antonio Carzaniga, Alexander L. Wolf
CIBCB
2007
IEEE
15 years 8 months ago
Prediction of Enzyme Catalytic Sites from Sequence Using Neural Networks
The accurate prediction of enzyme catalytic sites remains an open problem in bioinformatics. Recently, several structure-based methods have become popular; however, few robust seq...
Swati Pande, Amar Raheja, Dennis R. Livesay
GECCO
2009
Springer
15 years 11 months ago
Multiobjectivization for parameter estimation: a case-study on the segment polarity network of drosophila
Mathematical modeling for gene regulative networks (GRNs) provides an effective tool for hypothesis testing in biology. A necessary step in setting up such models is the estimati...
Tim Hohm, Eckart Zitzler