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» Complexity of sequences and dynamical systems
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96
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BMCBI
2007
108views more  BMCBI 2007»
15 years 28 days ago
Computer-aided identification of polymorphism sets diagnostic for groups of bacterial and viral genetic variants
Background: Single nucleotide polymorphisms (SNPs) and genes that exhibit presence/absence variation have provided informative marker sets for bacterial and viral genotyping. Iden...
Erin P. Price, John Inman-Bamber, Venugopal Thiruv...
109
Voted
BMCBI
2006
116views more  BMCBI 2006»
15 years 26 days ago
Optimized mixed Markov models for motif identification
Background: Identifying functional elements, such as transcriptional factor binding sites, is a fundamental step in reconstructing gene regulatory networks and remains a challengi...
Weichun Huang, David M. Umbach, Uwe Ohler, Leping ...
BMCBI
2007
148views more  BMCBI 2007»
15 years 24 days ago
fREDUCE: Detection of degenerate regulatory elements using correlation with expression
Background: The precision of transcriptional regulation is made possible by the specificity of physical interactions between transcription factors and their cognate binding sites ...
Randy Z. Wu, Christina Chaivorapol, Jiashun Zheng,...
P2P
2007
IEEE
113views Communications» more  P2P 2007»
15 years 7 months ago
Handling Network Partitions and Mergers in Structured Overlay Networks
Structured overlay networks form a major class of peerto-peer systems, which are touted for their abilities to scale, tolerate failures, and self-manage. Any long-lived Internet-s...
Tallat M. Shafaat, Ali Ghodsi, Seif Haridi
104
Voted
ASPLOS
2006
ACM
15 years 6 months ago
Introspective 3D chips
While the number of transistors on a chip increases exponentially over time, the productivity that can be realized from these systems has not kept pace. To deal with the complexit...
Shashidhar Mysore, Banit Agrawal, Navin Srivastava...