While graphics processing units (GPUs) provide low-cost and efficient platforms for accelerating high performance computations, the tedious process of performance tuning required...
Mehrzad Samadi, Amir Hormati, Mojtaba Mehrara, Jan...
Computational biology research is now faced with the burgeoning number of genome data. The rigorous postprocessing of this data requires an increased role for high performance com...
Abstract--Microarray-based comparative genomic hybridization (aCGH) offers an increasingly fine-grained method for detecting copy number variations in DNA. These copy number variat...
Jeffrey A. Delmerico, Nathanial A. Byrnes, Andrew ...
Concurrency control is one of the main sources of error and complexity in shared memory parallel programming. While there are several techniques to handle concurrency control such...
Luis Ceze, Christoph von Praun, Calin Cascaval, Pa...
We consider a class of algorithms related to Lempel-Ziv that incorporate restrictions on the manner in which the data can be parsed with the goal of introducing new tradeoffs betwe...
John T. Robinson, Luis Alfonso Lastras-Monta&ntild...