47 search results - page 5 / 10 » Compressed Pattern Matching in DNA Sequences |
107
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SIGMOD
2005
ACM
15 years 11 months ago
2005
ACM
We study a problem of mining frequently occurring periodic patterns with a gap requirement from sequences. Given a character sequence S of length L and a pattern P of length l, we...
RECOMB
2004
Springer
15 years 12 months ago
2004
Springer
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
127
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CPM
2005
Springer
15 years 5 months ago
2005
Springer
Abstract. Approximate string matching is a fundamental and challenging problem in computer science, for which a fast algorithm is highly demanded in many applications including tex...
101
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WABI
2007
Springer
15 years 5 months ago
2007
Springer
The comprehensive annotation of non-coding RNAs in newly sequenced genomes is still a largely unsolved problem because many functional RNAs exhibit not only poorly conserved sequen...
ISPAN
1997
IEEE
15 years 3 months ago
1997
IEEE
Abstract- String matching problem received much attention over the years due to its importance in various applications such as text/file comparison, DNA sequencing, search engines,...