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BMCBI
2005
246views more  BMCBI 2005»
15 years 4 months ago
ParPEST: a pipeline for EST data analysis based on parallel computing
Background: Expressed Sequence Tags (ESTs) are short and error-prone DNA sequences generated from the 5' and 3' ends of randomly selected cDNA clones. They provide an im...
Nunzio D'Agostino, Mario Aversano, Maria Luisa Chi...
167
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BMCBI
2011
14 years 11 months ago
ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring
Background: Since its inception, proteomics has essentially operated in a discovery mode with the goal of identifying and quantifying the maximal number of proteins in a sample. I...
Mi-Youn K. Brusniak, Sung-Tat Kwok, Mark Christian...
SIGMETRICS
1996
ACM
118views Hardware» more  SIGMETRICS 1996»
15 years 8 months ago
Integrating Performance Monitoring and Communication in Parallel Computers
A large and increasing gap exists between processor and memory speeds in scalable cache-coherent multiprocessors. To cope with this situation, programmers and compiler writers mus...
Margaret Martonosi, David Ofelt, Mark Heinrich
BMCBI
2010
127views more  BMCBI 2010»
15 years 4 months ago
Computational prediction of type III secreted proteins from gram-negative bacteria
Background: Type III secretion system (T3SS) is a specialized protein delivery system in gramnegative bacteria that injects proteins (called effectors) directly into the eukaryoti...
Yang Yang, Jiayuan Zhao, Robyn L. Morgan, Wenbo Ma...
AES
2005
Springer
137views Cryptology» more  AES 2005»
15 years 4 months ago
Design of a multimedia processor based on metrics computation
Media-processing applications, such as signal processing, 2D and 3D graphics rendering, and image compression, are the dominant workloads in many embedded systems today. The real-...
Nader Ben Amor, Yannick Le Moullec, Jean-Philippe ...