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» Computability of Models for Sequence Assembly
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NAR
2000
182views more  NAR 2000»
15 years 4 months ago
tmRDB (tmRNA database)
Maintained at the University of Texas Health Science Center at Tyler, Texas, the tmRNA database (tmRDB) is accessible at the URL http://psyche.uthct.edu/dbs/ tmRDB/tmRDB.html with...
Christian Zwieb, Jacek Wower
STOC
2007
ACM
142views Algorithms» more  STOC 2007»
16 years 4 months ago
Lower bounds for randomized read/write stream algorithms
Motivated by the capabilities of modern storage architectures, we consider the following generalization of the data stream model where the algorithm has sequential access to multi...
Paul Beame, T. S. Jayram, Atri Rudra
ATAL
2010
Springer
15 years 5 months ago
Planning against fictitious players in repeated normal form games
Planning how to interact against bounded memory and unbounded memory learning opponents needs different treatment. Thus far, however, work in this area has shown how to design pla...
Enrique Munoz de Cote, Nicholas R. Jennings
BMCBI
2004
151views more  BMCBI 2004»
15 years 4 months ago
Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics
Background: The general problem of RNA secondary structure prediction under the widely used thermodynamic model is known to be NP-complete when the structures considered include a...
Jens Reeder, Robert Giegerich
NAR
2011
198views Computer Vision» more  NAR 2011»
14 years 7 months ago
PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralo
The growing availability of complete genomic sequences from diverse species has brought about the need to scale up phylogenomic analyses, including the reconstruction of large col...
Jaime Huerta-Cepas, Salvador Capella-Gutiér...