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BMCBI
2007
169views more  BMCBI 2007»
14 years 9 months ago
Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana
Background: The central role of transcription factors (TFs) in higher eukaryotes has led to much interest in deciphering transcriptional regulatory interactions. Even in the best ...
Henning Redestig, Daniel Weicht, Joachim Selbig, M...
GECCO
2005
Springer
180views Optimization» more  GECCO 2005»
15 years 3 months ago
Inference of gene regulatory networks using s-system and differential evolution
In this work we present an improved evolutionary method for inferring S-system model of genetic networks from the time series data of gene expression. We employed Differential Ev...
Nasimul Noman, Hitoshi Iba
GECCO
2007
Springer
162views Optimization» more  GECCO 2007»
15 years 4 months ago
A multi-objective approach to discover biclusters in microarray data
The main motivation for using a multi–objective evolutionary algorithm for finding biclusters in gene expression data is motivated by the fact that when looking for biclusters ...
Federico Divina, Jesús S. Aguilar-Ruiz
GECCO
2007
Springer
197views Optimization» more  GECCO 2007»
15 years 4 months ago
Computational intelligence techniques: a study of scleroderma skin disease
This paper presents an analysis of microarray gene expression data from patients with and without scleroderma skin disease using computational intelligence and visual data mining ...
Julio J. Valdés, Alan J. Barton
RECOMB
2004
Springer
15 years 10 months ago
Computational identification of evolutionarily conserved exons
Phylogenetic hidden Markov models (phylo-HMMs) have recently been proposed as a means for addressing a multispecies version of the ab initio gene prediction problem. These models ...
Adam C. Siepel, David Haussler